GWAS

📐 Theory: Mixed Model & BLUP Family · Bayesian Alphabet (BayesR variable selection)

Goal

TODO: 1 sentence.

Setup

library(masreml)   # or masbayes, depending on tutorial
geno  <- read.csv("../demo-data/main/genotype.csv")
pheno <- read.csv("../demo-data/main/phenotype.csv")

Walkthrough

Note

TODO: stepwise code chunks with explanation.

Interpretation

Note

TODO: what the output means and how to act on it.

Same task in the other package

Note

TODO: cross-link to alternative implementation.